EnhancerDB
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  3. rs35525888[chr16:28192839]
Enhancers that have rs35525888[chr16:28192839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs35525888[chr16:28192839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28192824 28192839 PRDM1 JASPAR yes 10219648
chr16 28192833 28192854 IRF1 JASPAR yes 10219649
chr16 28192835 28192850 STAT2 JASPAR yes 10219650
chr16 28192838 28192853 FOXP1 JASPAR yes 10219651
chr16 28192839 28192854 FOXP1 JASPAR yes 10219652
Genes associated with rs35525888[chr16:28192839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More