EnhancerDB
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  3. rs35539162[chr16:69546523]
Enhancers that have rs35539162[chr16:69546523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69545169 69558956 enh4113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs35539162[chr16:69546523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69545181 69546553 ZNF143 GTRD no Epithelial (MCF-7) 21712086
chr16 69545323 69546541 ZNF143 GTRD no Epithelial (MCF-7) 21712087
chr16 69545345 69546562 ZNF143 GTRD no Epithelial (MCF-7) 21712089
chr16 69545399 69546574 ZNF143 GTRD no Epithelial (MCF-7) 21712090
chr16 69545406 69546568 ZNF143 GTRD no Epithelial (MCF-7) 21712091
chr16 69545436 69546690 ZNF143 GTRD no Epithelial (MCF-7) 21712094
chr16 69545478 69546548 ZNF143 GTRD no Epithelial (MCF-7) 21712095
chr16 69545557 69546821 ZNF143 GTRD no Epithelial (MCF-7) 21712099
chr16 69545716 69546613 ZNF143 GTRD no Epithelial (MCF-7) 21712116
chr16 69545828 69546826 ZNF143 GTRD no Epithelial (MCF-7) 21712129
chr16 69546122 69546654 ZNF143 GTRD no Epithelial (MCF-7) 21712137
chr16 69546520 69546535 FOXP1 JASPAR yes 11275211
chr16 69546521 69546536 FOXP1 JASPAR yes 11275212
chr16 69546521 69546542 IRF1 JASPAR yes 11275213
chr16 69546522 69546528 TBP TRANSFAC yes 11275214
chr16 69546522 69546537 FOXP1 JASPAR yes 11275215
Genes associated with rs35539162[chr16:69546523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More