EnhancerDB
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  3. rs35558456[chr17:70393727]
Enhancers that have rs35558456[chr17:70393727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs35558456[chr17:70393727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70393173 70393789 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784505
chr17 70393292 70393836 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784508
chr17 70393618 70393858 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784517
chr17 70393711 70393732 MAFG JASPAR yes 55782955
chr17 70393722 70393743 IRF1 JASPAR yes 55782956
chr17 70393723 70393744 IRF1 JASPAR yes 55782957
chr17 70393725 70393740 FOXP1 JASPAR yes 55782958
chr17 70393726 70393741 FOXP1 JASPAR yes 55782959
chr17 70393727 70393742 FOXP1 JASPAR yes 55782960
chr17 70393727 70393748 IRF1 JASPAR yes 55782961
Genes associated with rs35558456[chr17:70393727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More