EnhancerDB
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  3. rs35580425[chr17:70427379]
Enhancers that have rs35580425[chr17:70427379]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs35580425[chr17:70427379]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70427208 70427568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785159
chr17 70427242 70427532 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21785160
chr17 70427284 70427514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785161
chr17 70427329 70427553 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785162
chr17 70427370 70427380 ERF JASPAR yes 55787600
chr17 70427371 70427379 FEV JASPAR yes 55787601
Genes associated with rs35580425[chr17:70427379], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More