EnhancerDB
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  3. rs35640140[chr2:39317113]
Enhancers that have rs35640140[chr2:39317113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs35640140[chr2:39317113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39317100 39317115 MEF2C JASPAR yes 73180304
chr2 39317101 39317116 MEF2A JASPAR yes 73180305
chr2 39317102 39317114 MEF2A JASPAR yes 73180306
chr2 39317102 39317114 MEF2B JASPAR yes 73180307
chr2 39317102 39317114 MEF2D JASPAR yes 73180308
chr2 39317108 39317123 MEF2C JASPAR yes 73180309
chr2 39317108 39317129 IRF1 JASPAR yes 73180310
chr2 39317109 39317124 FOXP1 JASPAR yes 73180311
chr2 39317109 39317130 IRF1 JASPAR yes 73180312
chr2 39317110 39317125 FOXP1 JASPAR yes 73180313
chr2 39317111 39317126 FOXP1 JASPAR yes 73180314
chr2 39317111 39317132 IRF1 JASPAR yes 73180315
chr2 39317112 39317127 FOXP1 JASPAR yes 73180316
chr2 39317113 39317128 FOXP1 JASPAR yes 73180317
chr2 39317113 39317134 IRF1 JASPAR yes 73180318
Genes associated with rs35640140[chr2:39317113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More