EnhancerDB
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  3. rs35680828[chr1:41971000]
Enhancers that have rs35680828[chr1:41971000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs35680828[chr1:41971000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41970989 41971000 NFKB1 JASPAR yes 28396735
chr1 41970994 41971001 NFATC2 JASPAR yes 28396736
chr1 41971000 41971005 ETS2 TRANSFAC yes 28396737
Genes associated with rs35680828[chr1:41971000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More