EnhancerDB
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  3. rs35690546[chr16:28197993]
Enhancers that have rs35690546[chr16:28197993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs35690546[chr16:28197993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28197987 28198008 IRF1 JASPAR yes 10220411
chr16 28197988 28198009 IRF1 JASPAR yes 10220412
chr16 28197992 28198007 FOXP1 JASPAR yes 10220413
chr16 28197993 28198008 FOXP1 JASPAR yes 10220414
Genes associated with rs35690546[chr16:28197993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More