EnhancerDB
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  3. rs368009959[chr1:153568980]
Enhancers that have rs368009959[chr1:153568980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153567604 153573987 enh628
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs368009959[chr1:153568980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153564894 153570045 AR GTRD no Prostate (PC-3) 21339756
chr1 153565159 153569248 TCF7L2 GTRD no Colon (HCT116) 21339757
chr1 153565230 153570252 ZNF274 GTRD no Cervix (HeLa-S3) 21339758
chr1 153565323 153569412 TCF7L2 GTRD no Colon (HCT116) 21339759
chr1 153566370 153569277 ZNF274 GTRD no Cervix (HeLa-S3) 21339760
chr1 153567467 153569214 ZNF274 GTRD no Cervix (HeLa-S3) 21339761
chr1 153567482 153569339 TCF7L2 GTRD no Colon (HCT116) 21339763
chr1 153567486 153569333 ZNF274 GTRD no Cervix (HeLa-S3) 21339764
chr1 153567497 153569206 ZNF274 GTRD no Cervix (HeLa-S3) 21339765
chr1 153567501 153569445 TCF7L2 GTRD no Colon (HCT116) 21339766
chr1 153567514 153569080 ZNF274 GTRD no Cervix (HeLa-S3) 21339767
chr1 153567519 153569173 ZNF274 GTRD no Cervix (HeLa-S3) 21339768
chr1 153567537 153569223 ZNF274 GTRD no Cervix (HeLa-S3) 21339769
chr1 153567542 153569165 TCF7L2 GTRD no Colon (HCT116) 21339771
chr1 153567557 153569093 ZNF274 GTRD no Cervix (HeLa-S3) 21339773
chr1 153567567 153569269 ZNF274 GTRD no Cervix (HeLa-S3) 21339774
chr1 153567577 153569263 ZNF274 GTRD no Cervix (HeLa-S3) 21339775
chr1 153567597 153569148 ZNF274 GTRD no Cervix (HeLa-S3) 21339778
chr1 153567598 153569089 ZNF274 GTRD no Cervix (HeLa-S3) 21339779
chr1 153567630 153569049 ZNF274 GTRD no Cervix (HeLa-S3) 21339781
chr1 153567637 153569183 ZNF274 GTRD no Cervix (HeLa-S3) 21339782
chr1 153567684 153569102 ZNF274 GTRD no Cervix (HeLa-S3) 21339784
chr1 153568078 153569702 TCF7L2 GTRD no Colon (HCT116) 21339786
chr1 153568194 153569217 TCF7L2 GTRD no Colon (HCT116) 21339787
chr1 153568227 153569196 MYOD GTRD no Muscle (Myoblast) 21339788
chr1 153568272 153569042 ZNF274 GTRD no Cervix (HeLa-S3) 21339789
chr1 153568306 153569256 TCF7L2 GTRD no Colon (HCT116) 21339790
chr1 153568315 153569328 CTCF GTRD no Spleen 21339791
chr1 153568384 153568993 ZNF274 GTRD no Cervix (HeLa-S3) 21339792
chr1 153568441 153569196 TCF7L2 GTRD no Colon (HCT116) 21339794
chr1 153568456 153569020 TCF7L2 GTRD no Colon (HCT116) 21339795
chr1 153568543 153568989 ZNF274 GTRD no Cervix (HeLa-S3) 21339797
chr1 153568978 153568992 GATA2 JASPAR yes 32261587
Genes associated with rs368009959[chr1:153568980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More