EnhancerDB
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Enhancers that have rs368239871[chr17:54775140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54773925 54780615 enh17237
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs368239871[chr17:54775140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54775125 54775146 IRF1 JASPAR yes 54904425
chr17 54775127 54775142 PRDM1 JASPAR yes 54904426
chr17 54775127 54775142 STAT2 JASPAR yes 54904427
chr17 54775129 54775150 IRF1 JASPAR yes 54904428
chr17 54775130 54775145 FOXP1 JASPAR yes 54904429
chr17 54775130 54775151 IRF1 JASPAR yes 54904430
chr17 54775131 54775146 FOXP1 JASPAR yes 54904431
chr17 54775131 54775152 IRF1 JASPAR yes 54904432
chr17 54775132 54775153 IRF1 JASPAR yes 54904433
chr17 54775136 54775151 FOXP1 JASPAR yes 54904434
chr17 54775136 54775151 LEF1 JASPAR yes 54904435
chr17 54775136 54775157 IRF1 JASPAR yes 54904436
chr17 54775137 54775158 IRF1 JASPAR yes 54904437
chr17 54775138 54775153 FOXP1 JASPAR yes 54904438
chr17 54775138 54775159 IRF1 JASPAR yes 54904439
chr17 54775139 54775160 IRF1 JASPAR yes 54904440
Genes associated with rs368239871[chr17:54775140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More