EnhancerDB
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  3. rs368339428[chr2:224682338]
Enhancers that have rs368339428[chr2:224682338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224677744 224699315 enh34325
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs368339428[chr2:224682338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224682323 224682338 FOXP1 JASPAR yes 81290691
chr2 224682323 224682344 IRF1 JASPAR yes 81290692
chr2 224682324 224682339 FOXP1 JASPAR yes 81290693
chr2 224682324 224682345 IRF1 JASPAR yes 81290694
chr2 224682325 224682340 FOXP1 JASPAR yes 81290695
chr2 224682325 224682346 IRF1 JASPAR yes 81290696
chr2 224682326 224682341 FOXP1 JASPAR yes 81290697
chr2 224682326 224682347 IRF1 JASPAR yes 81290698
chr2 224682327 224682342 FOXP1 JASPAR yes 81290699
chr2 224682329 224682344 FOXP1 JASPAR yes 81290700
chr2 224682330 224682351 IRF1 JASPAR yes 81290701
chr2 224682331 224682346 FOXP1 JASPAR yes 81290702
chr2 224682331 224682352 IRF1 JASPAR yes 81290703
chr2 224682336 224682351 FOXP1 JASPAR yes 81290704
chr2 224682336 224682357 IRF1 JASPAR yes 81290705
Genes associated with rs368339428[chr2:224682338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More