EnhancerDB
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  3. rs369092588[chr16:28197859]
Enhancers that have rs369092588[chr16:28197859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs369092588[chr16:28197859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28197848 28197866 IRF2 JASPAR yes 10220368
chr16 28197849 28197870 IRF1 JASPAR yes 10220369
chr16 28197851 28197866 PRDM1 JASPAR yes 10220370
chr16 28197851 28197866 STAT2 JASPAR yes 10220371
chr16 28197853 28197865 IRF1 JASPAR yes 10220372
chr16 28197853 28197867 IRF7 JASPAR yes 10220373
chr16 28197853 28197868 IRF9 JASPAR yes 10220374
chr16 28197854 28197872 IRF2 JASPAR yes 10220375
chr16 28197855 28197870 FOXP1 JASPAR yes 10220376
chr16 28197855 28197870 MEF2C JASPAR yes 10220377
chr16 28197855 28197876 IRF1 JASPAR yes 10220378
chr16 28197856 28197868 FOXC2 JASPAR yes 10220379
chr16 28197856 28197869 POU2F2 JASPAR yes 10220380
chr16 28197856 28197870 POU1F1 JASPAR yes 10220381
chr16 28197857 28197868 FOXC1 JASPAR yes 10220382
chr16 28197857 28197872 PRDM1 JASPAR yes 10220383
chr16 28197857 28197872 STAT2 JASPAR yes 10220384
chr16 28197858 28197862 YY1 TRANSFAC yes 10220385
chr16 28197858 28197872 STAT1 JASPAR yes 10220386
chr16 28197859 28197871 IRF1 JASPAR yes 10220387
chr16 28197859 28197873 IRF7 JASPAR yes 10220388
chr16 28197859 28197873 IRF8 JASPAR yes 10220389
chr16 28197859 28197874 IRF9 JASPAR yes 10220390
Genes associated with rs369092588[chr16:28197859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More