EnhancerDB
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  3. rs369842088[chr1:17870057]
Enhancers that have rs369842088[chr1:17870057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs369842088[chr1:17870057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17870046 17870061 TFAP2C JASPAR yes 27099461
chr1 17870047 17870058 TFAP2A JASPAR yes 27099462
chr1 17870047 17870058 TFAP2B JASPAR yes 27099463
chr1 17870048 17870057 TFAP2A JASPAR yes 27099464
Genes associated with rs369842088[chr1:17870057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More