EnhancerDB
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  3. rs372027623[chr12:54655087]
Enhancers that have rs372027623[chr12:54655087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54649185 54662915 enh2377
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs372027623[chr12:54655087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54655070 54655091 IRF1 JASPAR yes 121031781
chr12 54655071 54655092 IRF1 JASPAR yes 121031782
chr12 54655075 54655090 FOXP1 JASPAR yes 121031783
chr12 54655075 54655090 LEF1 JASPAR yes 121031784
chr12 54655075 54655096 IRF1 JASPAR yes 121031785
chr12 54655076 54655097 IRF1 JASPAR yes 121031786
chr12 54655077 54655092 FOXP1 JASPAR yes 121031787
chr12 54655077 54655098 IRF1 JASPAR yes 121031788
chr12 54655081 54655102 IRF1 JASPAR yes 121031789
chr12 54655082 54655097 FOXP1 JASPAR yes 121031790
chr12 54655084 54655099 FOXP1 JASPAR yes 121031791
chr12 54655086 54655101 FOXP1 JASPAR yes 121031792
chr12 54655087 54655102 FOXP1 JASPAR yes 121031793
Genes associated with rs372027623[chr12:54655087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More