EnhancerDB
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  3. rs372852899[chr1:54054085]
Enhancers that have rs372852899[chr1:54054085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54045925 54059092 enh26707
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs372852899[chr1:54054085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54051058 54055279 ZNF274 GTRD no Bone Marrow (K562) 107804010
chr1 54051288 54055240 ZNF274 GTRD no Bone Marrow (K562) 107804011
chr1 54051504 54055886 ZNF274 GTRD no Bone Marrow (K562) 107804012
chr1 54051524 54054710 ZNF274 GTRD no Blood (GM12878) 107804013
chr1 54051609 54054952 ZNF274 GTRD no Liver (HepG2) 107804014
chr1 54051654 54054972 ZNF274 GTRD no Bone Marrow (K562) 107804015
chr1 54051686 54055847 ZNF274 GTRD no Bone Marrow (K562) 107804016
chr1 54051701 54055017 ZNF274 GTRD no Blood (GM12878) 107804018
chr1 54051728 54054125 ZNF143 GTRD no Epithelial (MCF-7) 107804020
chr1 54051767 54054138 ZNF274 GTRD no Liver (HepG2) 107804023
chr1 54051769 54054829 ZNF274 GTRD no Cervix (HeLa-S3) 107804024
chr1 54051770 54054117 ZNF274 GTRD no Cervix (HeLa-S3) 107804025
chr1 54051794 54054885 ZNF274 GTRD no Blood (GM12878) 107804027
chr1 54051813 54054906 ZNF274 GTRD no Blood (GM12878) 107804028
chr1 54051818 54054947 ZNF274 GTRD no Bone Marrow (K562) 107804029
chr1 54051842 54054813 ZNF274 GTRD no Liver (HepG2) 107804031
chr1 54051858 54054314 ZBTB33 GTRD no Lung (A549) 107804032
chr1 54051867 54054743 ZNF274 GTRD no Bone Marrow (K562) 107804033
chr1 54051873 54054699 ZNF274 GTRD no Bone Marrow (K562) 107804035
chr1 54051877 54054827 ZNF143 GTRD no Epithelial (MCF-7) 107804036
chr1 54051884 54054752 ZNF274 GTRD no Bone Marrow (K562) 107804037
chr1 54051886 54054822 ZNF274 GTRD no Bone Marrow (K562) 107804038
chr1 54051900 54054836 ZNF274 GTRD no Bone Marrow (K562) 107804039
chr1 54051901 54055117 ZNF274 GTRD no Bone Marrow (K562) 107804040
chr1 54051923 54054232 ZNF274 GTRD no Liver (HepG2) 107804042
chr1 54051930 54054973 ZNF274 GTRD no Bone Marrow (K562) 107804043
chr1 54051946 54054856 ZNF274 GTRD no Bone Marrow (K562) 107804044
chr1 54051977 54054190 ZNF274 GTRD no Cervix (HeLa-S3) 107804045
chr1 54051977 54054869 ZNF274 GTRD no Bone Marrow (K562) 107804046
chr1 54051981 54054199 ZNF274 GTRD no Bone Marrow (K562) 107804047
chr1 54052024 54054978 STAT3 GTRD no Blood (OCI-LY7) 107804049
chr1 54052073 54054649 ZNF274 GTRD no Blood (GM12878) 107804053
chr1 54052073 54054680 ZNF143 GTRD no Epithelial (MCF-7) 107804054
chr1 54052075 54054192 ZNF274 GTRD no Bone Marrow (K562) 107804055
chr1 54052117 54054252 ZNF274 GTRD no Blood (GM12878) 107804057
chr1 54052151 54054234 ZBTB33 GTRD no Brain (SK-N-SH) 107804058
chr1 54052162 54054170 ZNF274 GTRD no Bone Marrow (K562) 107804059
chr1 54052174 54054252 ZNF274 GTRD no Cervix (HeLa-S3) 107804060
chr1 54052184 54054274 ZNF274 GTRD no Blood (GM12878) 107804061
chr1 54052187 54054180 ZNF274 GTRD no Cervix (HeLa-S3) 107804062
chr1 54052195 54054340 ZNF274 GTRD no Blood (GM12878) 107804064
chr1 54052196 54054415 ZNF274 GTRD no Cervix (HeLa-S3) 107804065
chr1 54052203 54054242 ZNF274 GTRD no Bone Marrow (K562) 107804067
chr1 54052210 54055120 ZNF274 GTRD no Bone Marrow (K562) 107804070
chr1 54052212 54054215 ZNF274 GTRD no Cervix (HeLa-S3) 107804071
chr1 54052219 54054241 ZNF274 GTRD no Liver (HepG2) 107804073
chr1 54052220 54054223 ZBTB33 GTRD no Lung (A549) 107804074
chr1 54052220 54054304 ZNF274 GTRD no Cervix (HeLa-S3) 107804075
chr1 54052221 54054224 ZNF274 GTRD no Bone Marrow (K562) 107804076
chr1 54052238 54054132 ZNF274 GTRD no Liver (HepG2) 107804078
chr1 54052243 54054322 ZNF274 GTRD no Blood (GM12878) 107804079
chr1 54052247 54054436 ZNF274 GTRD no Cervix (HeLa-S3) 107804081
chr1 54052253 54054978 ZNF274 GTRD no Bone Marrow (K562) 107804082
chr1 54052254 54054731 ZBTB33 GTRD no Brain (SK-N-SH) 107804083
chr1 54052263 54054199 TCF7L2 GTRD no Colon (HCT116) 107804085
chr1 54052265 54054641 ZBTB33 GTRD no Brain (SK-N-SH) 107804086
chr1 54052268 54054198 ZNF274 GTRD no Bone Marrow (K562) 107804088
chr1 54052279 54054759 ZNF274 GTRD no Bone Marrow (K562) 107804089
chr1 54052286 54054926 ZNF274 GTRD no Bone Marrow (K562) 107804090
chr1 54052293 54054455 ZNF274 GTRD no Liver (HepG2) 107804091
chr1 54052308 54054124 ZNF274 GTRD no Liver (HepG2) 107804093
chr1 54052312 54054174 ZBTB33 GTRD no Lung (A549) 107804094
chr1 54052318 54055023 ZNF274 GTRD no Bone Marrow (K562) 107804095
chr1 54052322 54054104 ZNF274 GTRD no Liver (HepG2) 107804096
chr1 54052332 54054114 ZNF274 GTRD no Liver (HepG2) 107804097
chr1 54052357 54054480 ZNF143 GTRD no Epithelial (MCF-7) 107804098
chr1 54052369 54054231 ZNF274 GTRD no Bone Marrow (K562) 107804100
chr1 54052399 54054300 ZBTB33 GTRD no Lung (A549) 107804104
chr1 54052405 54054132 ZNF274 GTRD no Blood (GM12878) 107804105
chr1 54052426 54054491 ZNF274 GTRD no Blood (GM12878) 107804108
chr1 54052438 54054347 ZNF274 GTRD no Blood (GM12878) 107804111
chr1 54052449 54054454 ZNF274 GTRD no Blood (GM12878) 107804115
chr1 54052451 54054241 ZNF143 GTRD no Epithelial (MCF-7) 107804117
chr1 54052497 54054663 ZNF274 GTRD no Blood (GM12878) 107804122
chr1 54052531 54054096 TCF7L2 GTRD no Colon (HCT116) 107804127
chr1 54052531 54054123 ZBTB33 GTRD no Lung (A549) 107804128
chr1 54052556 54054130 ZBTB33 GTRD no Lung (A549) 107804132
chr1 54052567 54054135 ZBTB33 GTRD no Lung (A549) 107804133
chr1 54052584 54054209 ZNF143 GTRD no Epithelial (MCF-7) 107804136
chr1 54052594 54054245 ZNF274 GTRD no Liver (HepG2) 107804139
chr1 54052597 54054224 ZNF274 GTRD no Liver (HepG2) 107804141
chr1 54052637 54054166 ZBTB33 GTRD no Lung (A549) 107804147
chr1 54052662 54054715 ZNF274 GTRD no Bone Marrow (K562) 107804154
chr1 54052694 54054119 ZNF274 GTRD no Bone Marrow (K562) 107804159
chr1 54052705 54054196 ZNF274 GTRD no Blood (GM12878) 107804160
chr1 54052738 54054094 TCF7L2 GTRD no Colon (HCT116) 107804164
chr1 54052772 54054107 ZNF274 GTRD no Bone Marrow (K562) 107804166
chr1 54052785 54054936 ZNF274 GTRD no Blood (GM12878) 107804169
chr1 54052820 54054231 ZNF143 GTRD no Epithelial (MCF-7) 107804172
chr1 54052827 54054223 ZNF274 GTRD no Blood (GM12878) 107804173
chr1 54052855 54054122 ZNF274 GTRD no Liver (HepG2) 107804181
chr1 54052891 54054956 ZNF274 GTRD no Bone Marrow (K562) 107804183
chr1 54052972 54054272 ZNF274 GTRD no Bone Marrow (K562) 107804194
chr1 54052977 54054831 ZNF274 GTRD no Bone Marrow (K562) 107804195
chr1 54052979 54054829 ZNF274 GTRD no Bone Marrow (K562) 107804196
Genes associated with rs372852899[chr1:54054085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More