EnhancerDB
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  3. rs373808408[chr17:54860872]
Enhancers that have rs373808408[chr17:54860872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs373808408[chr17:54860872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54860149 54863434 ZNF274 GTRD no Bone Marrow (K562) 21773042
chr17 54860393 54861197 ZNF274 GTRD no Bone Marrow (K562) 21773043
chr17 54860450 54863362 ZNF274 GTRD no Bone Marrow (K562) 21773044
chr17 54860455 54862808 ZNF274 GTRD no Bone Marrow (K562) 21773045
chr17 54860464 54861821 ZNF274 GTRD no Bone Marrow (K562) 21773046
chr17 54860470 54862184 ZNF274 GTRD no Bone Marrow (K562) 21773047
chr17 54860475 54861705 ZNF274 GTRD no Bone Marrow (K562) 21773048
chr17 54860495 54862796 ZNF274 GTRD no Bone Marrow (K562) 21773049
chr17 54860501 54862265 ZNF274 GTRD no Bone Marrow (K562) 21773050
chr17 54860512 54862683 ZNF274 GTRD no Bone Marrow (K562) 21773051
chr17 54860513 54862781 ZNF274 GTRD no Bone Marrow (K562) 21773052
chr17 54860539 54861809 ZNF274 GTRD no Bone Marrow (K562) 21773053
chr17 54860563 54862041 ZNF274 GTRD no Bone Marrow (K562) 21773054
chr17 54860600 54861639 ZNF274 GTRD no Bone Marrow (K562) 21773055
chr17 54860610 54861830 ZNF274 GTRD no Bone Marrow (K562) 21773056
chr17 54860617 54861141 ZNF274 GTRD no Bone Marrow (K562) 21773057
chr17 54860622 54861955 ZNF274 GTRD no Bone Marrow (K562) 21773058
chr17 54860623 54861524 ZNF274 GTRD no Bone Marrow (K562) 21773059
chr17 54860625 54860955 ZNF274 GTRD no Bone Marrow (K562) 21773060
chr17 54860627 54861678 ZNF274 GTRD no Bone Marrow (K562) 21773061
chr17 54860633 54862068 ZNF274 GTRD no Bone Marrow (K562) 21773062
chr17 54860633 54862279 ZNF274 GTRD no Bone Marrow (K562) 21773063
chr17 54860636 54861999 ZNF274 GTRD no Bone Marrow (K562) 21773064
chr17 54860639 54861530 ZNF274 GTRD no Bone Marrow (K562) 21773065
chr17 54860651 54861829 ZNF274 GTRD no Bone Marrow (K562) 21773066
chr17 54860655 54862284 ZNF274 GTRD no Bone Marrow (K562) 21773067
chr17 54860670 54862227 ZNF274 GTRD no Bone Marrow (K562) 21773068
chr17 54860697 54861015 ZNF274 GTRD no Bone Marrow (K562) 21773069
chr17 54860729 54861718 ZNF274 GTRD no Bone Marrow (K562) 21773070
chr17 54860741 54860967 ZNF274 GTRD no Bone Marrow (K562) 21773071
chr17 54860750 54861597 ZNF274 GTRD no Bone Marrow (K562) 21773072
chr17 54860772 54861559 ZNF274 GTRD no Bone Marrow (K562) 21773073
chr17 54860861 54860876 FOXP1 JASPAR yes 54912619
chr17 54860866 54860881 FOXP1 JASPAR yes 54912620
chr17 54860867 54860888 IRF1 JASPAR yes 54912621
chr17 54860868 54860883 FOXP1 JASPAR yes 54912622
chr17 54860868 54860888 RREB1 JASPAR yes 54912623
chr17 54860868 54860889 IRF1 JASPAR yes 54912624
chr17 54860869 54860884 FOXP1 JASPAR yes 54912625
chr17 54860869 54860890 IRF1 JASPAR yes 54912626
chr17 54860870 54860885 FOXP1 JASPAR yes 54912627
chr17 54860870 54860891 IRF1 JASPAR yes 54912628
chr17 54860871 54860886 FOXP1 JASPAR yes 54912629
Genes associated with rs373808408[chr17:54860872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More