EnhancerDB
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  3. rs374116640[chr17:70387127]
Enhancers that have rs374116640[chr17:70387127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs374116640[chr17:70387127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70387121 70387131 GSX2 JASPAR yes 55781955
chr17 70387121 70387131 HESX1 JASPAR yes 55781956
chr17 70387121 70387131 LBX2 JASPAR yes 55781957
chr17 70387121 70387131 MIXL1 JASPAR yes 55781958
chr17 70387121 70387131 MNX1 JASPAR yes 55781959
chr17 70387121 70387131 RAX JASPAR yes 55781960
chr17 70387122 70387130 ISX JASPAR yes 55781961
chr17 70387122 70387130 LHX9 JASPAR yes 55781962
chr17 70387122 70387130 LMX1B JASPAR yes 55781963
chr17 70387122 70387130 PRRX1 JASPAR yes 55781964
chr17 70387122 70387130 RAX2 JASPAR yes 55781965
chr17 70387122 70387130 SHOX JASPAR yes 55781966
chr17 70387122 70387130 UNCX JASPAR yes 55781967
chr17 70387123 70387134 BATF JASPAR yes 55781968
chr17 70387125 70387136 FOSL1 JASPAR yes 55781969
Genes associated with rs374116640[chr17:70387127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More