EnhancerDB
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  3. rs374234566[chr12:52422687]
Enhancers that have rs374234566[chr12:52422687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs374234566[chr12:52422687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52422675 52422687 YY1 JASPAR yes 120913984
chr12 52422682 52422697 FOXP1 JASPAR yes 120913986
chr12 52422683 52422704 IRF1 JASPAR yes 120913987
chr12 52422685 52422691 TBP TRANSFAC yes 120913988
chr12 52422687 52422699 IRF1 JASPAR yes 120913989
chr12 52422687 52422702 STAT2 JASPAR yes 120913990
Genes associated with rs374234566[chr12:52422687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More