EnhancerDB
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  3. rs374292060[chr1:41956630]
Enhancers that have rs374292060[chr1:41956630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs374292060[chr1:41956630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41956625 41956640 TFAP2A JASPAR yes 28394713
chr1 41956627 41956642 TFAP2C JASPAR yes 28394714
chr1 41956628 41956640 TFAP2A JASPAR yes 28394715
chr1 41956628 41956640 TFAP2B JASPAR yes 28394716
chr1 41956628 41956640 TFAP2C JASPAR yes 28394717
Genes associated with rs374292060[chr1:41956630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More