EnhancerDB
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Enhancers that have rs375248459[chr19:6238709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6230503 6255735 enh4983
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs375248459[chr19:6238709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6237629 6238973 ZNF274 GTRD no Bone Marrow (K562) 21844841
chr19 6237629 6238973 ZNF274 GTRD no Bone Marrow (K562) 108377505
chr19 6237688 6238762 ZNF274 GTRD no Bone Marrow (K562) 21844842
chr19 6237688 6238762 ZNF274 GTRD no Bone Marrow (K562) 108377506
chr19 6237989 6238776 ZBTB33 GTRD no Brain (SK-N-SH) 21844843
chr19 6237989 6238776 ZBTB33 GTRD no Brain (SK-N-SH) 108377507
chr19 6238032 6238738 ZNF274 GTRD no Bone Marrow (K562) 21844844
chr19 6238032 6238738 ZNF274 GTRD no Bone Marrow (K562) 108377508
chr19 6238093 6238714 GATA2 UCSC Txn Factor no Conserved 108377513
chr19 6238195 6238711 ZNF274 GTRD no Bone Marrow (K562) 21844856
chr19 6238195 6238711 ZNF274 GTRD no Bone Marrow (K562) 108377522
chr19 6238353 6238809 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21844860
chr19 6238353 6238809 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108377526
chr19 6238359 6239121 TCF7L2 GTRD no Colon (HCT116) 108377527
chr19 6238370 6239163 TCF7L2 GTRD no Colon (HCT116) 108377528
chr19 6238592 6238927 ZNF274 GTRD no Bone Marrow (K562) 21844862
chr19 6238592 6238927 ZNF274 GTRD no Bone Marrow (K562) 108377530
chr19 6238705 6238724 REST JASPAR yes 112262775
chr19 6238707 6238713 SP1 TRANSFAC yes 112262776
Genes associated with rs375248459[chr19:6238709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More