EnhancerDB
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  3. rs375444093[chr16:27328946]
Enhancers that have rs375444093[chr16:27328946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27322265 27344955 enh16614
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs375444093[chr16:27328946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27328940 27328950 HOXC10 JASPAR yes 10186104
chr16 27328940 27328950 HOXD11 JASPAR yes 10186105
chr16 27328940 27328951 HOXA10 JASPAR yes 10186106
chr16 27328940 27328951 HOXC11 JASPAR yes 10186107
chr16 27328940 27328951 HOXC12 JASPAR yes 10186108
chr16 27328940 27328951 HOXC13 JASPAR yes 10186109
chr16 27328940 27328951 HOXD12 JASPAR yes 10186110
chr16 27328941 27328950 CDX1 JASPAR yes 10186111
chr16 27328941 27328952 CDX2 JASPAR yes 10186112
Genes associated with rs375444093[chr16:27328946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More