EnhancerDB
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  3. rs376172990[chr19:14477952]
Enhancers that have rs376172990[chr19:14477952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs376172990[chr19:14477952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14474907 14478714 ZNF274 GTRD no Bone Marrow (K562) 21853333
chr19 14477561 14478314 ZNF274 GTRD no Bone Marrow (K562) 21853427
chr19 14477712 14478509 ZNF143 GTRD no Epithelial (MCF-7) 21853429
chr19 14477714 14478359 ZNF143 GTRD no Epithelial (MCF-7) 21853430
chr19 14477770 14478912 ZNF143 GTRD no Epithelial (MCF-7) 21853431
chr19 14477796 14478729 ZNF143 GTRD no Epithelial (MCF-7) 21853432
chr19 14477897 14478794 TCF7L2 GTRD no Colon (HCT116) 21853433
chr19 14477934 14477955 IRF1 JASPAR yes 112566515
chr19 14477939 14477954 FOXP1 JASPAR yes 112566516
chr19 14477939 14477960 IRF1 JASPAR yes 112566517
chr19 14477940 14477955 FOXP1 JASPAR yes 112566518
chr19 14477940 14477961 IRF1 JASPAR yes 112566519
chr19 14477941 14477956 FOXP1 JASPAR yes 112566520
chr19 14477942 14477957 FOXP1 JASPAR yes 112566521
chr19 14477943 14477958 FOXP1 JASPAR yes 112566522
chr19 14477945 14477966 IRF1 JASPAR yes 112566523
chr19 14477947 14477962 LEF1 JASPAR yes 112566524
chr19 14477949 14477963 ONECUT1 JASPAR yes 112566525
chr19 14477949 14477963 ONECUT2 JASPAR yes 112566526
chr19 14477949 14477963 ONECUT3 JASPAR yes 112566527
Genes associated with rs376172990[chr19:14477952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More