EnhancerDB
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  3. rs376309812[chr17:79018228]
Enhancers that have rs376309812[chr17:79018228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs376309812[chr17:79018228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79017268 79018244 ZNF143 GTRD no Epithelial (MCF-7) 21797531
chr17 79017268 79018244 ZNF143 GTRD no Epithelial (MCF-7) 108308356
chr17 79017329 79018281 ZNF143 GTRD no Epithelial (MCF-7) 21797535
chr17 79017329 79018281 ZNF143 GTRD no Epithelial (MCF-7) 108308360
chr17 79017382 79018296 ZNF143 GTRD no Epithelial (MCF-7) 21797540
chr17 79017382 79018296 ZNF143 GTRD no Epithelial (MCF-7) 108308365
chr17 79017546 79018552 ZNF274 GTRD no Cervix (HeLa-S3) 21797555
chr17 79017546 79018552 ZNF274 GTRD no Cervix (HeLa-S3) 108308381
chr17 79017546 79018552 ZNF274 GTRD no Cervix (HeLa-S3) 108308382
chr17 79018009 79018368 ZNF274 GTRD no Liver (HepG2) 108308407
chr17 79018017 79018391 ZNF274 GTRD no Cervix (HeLa-S3) 21797566
chr17 79018017 79018391 ZNF274 GTRD no Cervix (HeLa-S3) 108308408
chr17 79018180 79018656 ZBTB33 GTRD no Lung (A549) 108308409
chr17 79018227 79018241 GATA2 JASPAR yes 56300525
Genes associated with rs376309812[chr17:79018228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More