EnhancerDB
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  3. rs376402579[chr1:39419832]
Enhancers that have rs376402579[chr1:39419832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs376402579[chr1:39419832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39419823 39419832 PITX3 JASPAR yes 28243407
chr1 39419823 39419833 GSC2 JASPAR yes 28243408
chr1 39419823 39419833 GSC JASPAR yes 28243409
chr1 39419824 39419832 OTX1 JASPAR yes 28243410
chr1 39419830 39419849 REST JASPAR yes 28243411
Genes associated with rs376402579[chr1:39419832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More