EnhancerDB
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  3. rs3766040[chr1:169090883]
Enhancers that have rs3766040[chr1:169090883]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs3766040[chr1:169090883]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169090865 169090886 IRF1 JASPAR yes 32985036
chr1 169090869 169090884 PRDM1 JASPAR yes 32985037
chr1 169090869 169090887 IRF2 JASPAR yes 32985038
chr1 169090872 169090885 SMAD2 JASPAR yes 32985039
Genes associated with rs3766040[chr1:169090883], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More