EnhancerDB
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  3. rs376846949[chr2:220235605]
Enhancers that have rs376846949[chr2:220235605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 220231345 220236575 enh19245
Cervix (HeLa-S3) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs376846949[chr2:220235605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 220235589 220235606 RXRA JASPAR yes 81034311
chr2 220235600 220235613 DUXA JASPAR yes 81034313
chr2 220235601 220235612 DUX4 JASPAR yes 81034314
chr2 220235601 220235612 PHOX2A JASPAR yes 81034315
chr2 220235601 220235612 PROP1 JASPAR yes 81034316
chr2 220235604 220235614 EMX1 JASPAR yes 81034317
chr2 220235604 220235614 EMX2 JASPAR yes 81034318
chr2 220235604 220235614 GBX2 JASPAR yes 81034319
chr2 220235604 220235614 HOXB2 JASPAR yes 81034320
chr2 220235604 220235614 HOXB3 JASPAR yes 81034321
chr2 220235604 220235614 LHX6 JASPAR yes 81034322
chr2 220235604 220235614 MEOX1 JASPAR yes 81034323
chr2 220235604 220235614 MEOX2 JASPAR yes 81034324
chr2 220235604 220235614 MNX1 JASPAR yes 81034325
chr2 220235604 220235614 POU6F1 JASPAR yes 81034326
chr2 220235605 220235613 LMX1A JASPAR yes 81034327
chr2 220235605 220235613 LMX1B JASPAR yes 81034328
chr2 220235605 220235613 NKX6-1 JASPAR yes 81034329
chr2 220235605 220235613 NKX6-2 JASPAR yes 81034330
chr2 220235605 220235613 PDX1 JASPAR yes 81034331
chr2 220235605 220235613 VAX1 JASPAR yes 81034332
chr2 220235605 220235613 VAX2 JASPAR yes 81034333
chr2 220235605 220235613 VSX1 JASPAR yes 81034334
Genes associated with rs376846949[chr2:220235605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More