EnhancerDB
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  3. rs377080543[chr1:28459267]
Enhancers that have rs377080543[chr1:28459267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28446825 28468055 enh182
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Stomach
Transcript factors that have rs377080543[chr1:28459267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28459256 28459270 RXRB JASPAR yes 27744697
chr1 28459256 28459270 RXRG JASPAR yes 27744698
chr1 28459256 28459271 NR2C2 JASPAR yes 27744699
Genes associated with rs377080543[chr1:28459267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More