EnhancerDB
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  3. rs377417938[chr12:52422999]
Enhancers that have rs377417938[chr12:52422999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs377417938[chr12:52422999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52422815 52423528 ZNF143 GTRD no Epithelial (MCF-7) 21545998
chr12 52422815 52423528 ZNF143 GTRD no Epithelial (MCF-7) 108032886
chr12 52422841 52423644 TEF1 GTRD no Bone (Osteoblast) 108032887
chr12 52422998 52423019 REST JASPAR yes 120914061
chr12 52422999 52423018 REST JASPAR yes 120914062
Genes associated with rs377417938[chr12:52422999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More