EnhancerDB
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  3. rs3780478[chr9:33164116]
Enhancers that have rs3780478[chr9:33164116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 33148972 33165175 enh25532
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3780478[chr9:33164116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 33164108 33164116 TBX5 JASPAR yes 83777978
chr9 33164108 33164117 ZEB1 JASPAR yes 83777979
chr9 33164108 33164120 PKNOX1 JASPAR yes 83777980
chr9 33164108 33164120 PKNOX2 JASPAR yes 83777981
chr9 33164108 33164120 TGIF1 JASPAR yes 83777982
chr9 33164108 33164120 TGIF2 JASPAR yes 83777983
chr9 33164108 33164121 ZBTB18 JASPAR yes 83777984
chr9 33164109 33164119 FIGLA JASPAR yes 83777985
chr9 33164109 33164119 ID4 JASPAR yes 83777986
chr9 33164109 33164119 TCF3 JASPAR yes 83777987
chr9 33164109 33164119 TCF4 JASPAR yes 83777988
chr9 33164110 33164119 SNAI2 JASPAR yes 83777989
chr9 33164111 33164116 USF2 TRANSFAC yes 83777990
chr9 33164114 33164118 NFE TRANSFAC yes 83777991
chr9 33164116 33164126 TFAP4 JASPAR yes 83777992
Genes associated with rs3780478[chr9:33164116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More