EnhancerDB
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  3. rs378200[chr16:4143181]
Enhancers that have rs378200[chr16:4143181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4129065 4154135 enh3862
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Brain (SK-N-SH) Bone (Osteoblast) Lung Lung (A549) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs378200[chr16:4143181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4143171 4143183 PBX1 JASPAR yes 9253147
chr16 4143173 4143183 CUX1 JASPAR yes 9253148
chr16 4143173 4143183 CUX2 JASPAR yes 9253149
chr16 4143173 4143183 PAX3 JASPAR yes 9253150
chr16 4143173 4143183 PAX7 JASPAR yes 9253151
chr16 4143177 4143198 IRF1 JASPAR yes 9253152
chr16 4143181 4143196 PRDM1 JASPAR yes 9253153
Genes associated with rs378200[chr16:4143181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More