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- rs3786993[chr19:802378]
Enhancers that have rs3786993[chr19:802378]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
793985 |
803515 |
enh99530 |
|
|
Transcript factors that have rs3786993[chr19:802378]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
800075
|
804663
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108346942
|
|
|
chr19
|
800092
|
802901
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108346945
|
|
|
chr19
|
800106
|
809240
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108346948
|
|
|
chr19
|
800106
|
809240
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108346949
|
|
|
chr19
|
800119
|
802569
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108346952
|
|
|
chr19
|
800171
|
806787
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108346961
|
|
|
chr19
|
800209
|
802973
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108346964
|
|
|
chr19
|
800291
|
807499
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108346973
|
|
|
chr19
|
800319
|
802779
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108346976
|
|
|
chr19
|
802378
|
802392
|
GLIS3
|
JASPAR
|
yes
|
|
111978847
|
|
Genes associated with rs3786993[chr19:802378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
1397091
|
1401569
|
-
|
GAMT
|
ENSG00000130005.7
|
1401569
|
594713
|
Uterus
|
0.470365
|
16745
|
|