EnhancerDB
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  3. rs3789508[chr1:6336557]
Enhancers that have rs3789508[chr1:6336557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6329205 6339045 enh11439
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Spleen Muscle (Myotube) Uterus Heart
chr1 6336471 6336830 vista164
VISTA
Transcript factors that have rs3789508[chr1:6336557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6336542 6336558 RFX4 JASPAR yes 26385674
chr1 6336542 6336558 RFX4 JASPAR yes 118221055
chr1 6336557 6336576 REST JASPAR yes 26385675
chr1 6336557 6336576 REST JASPAR yes 118221056
Genes associated with rs3789508[chr1:6336557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 6307406 6321035 - GPR153 ENSG00000158292.6 6321035 15522 Esophagus 0.0290614 95