EnhancerDB
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  3. rs3828112[chr1:200042031]
Enhancers that have rs3828112[chr1:200042031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200039825 200047707 enh87663
Stomach Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs3828112[chr1:200042031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200042025 200042035 ESX1 JASPAR yes 34411970
chr1 200042025 200042035 GBX2 JASPAR yes 34411971
chr1 200042025 200042035 HESX1 JASPAR yes 34411972
chr1 200042025 200042035 LBX2 JASPAR yes 34411973
chr1 200042025 200042035 MIXL1 JASPAR yes 34411974
chr1 200042025 200042035 RAX JASPAR yes 34411975
chr1 200042026 200042034 ISX JASPAR yes 34411976
chr1 200042026 200042034 LHX9 JASPAR yes 34411977
chr1 200042026 200042034 LMX1B JASPAR yes 34411978
chr1 200042026 200042034 PRRX1 JASPAR yes 34411979
chr1 200042026 200042034 RAX2 JASPAR yes 34411980
chr1 200042026 200042034 SHOX JASPAR yes 34411981
chr1 200042026 200042034 UNCX JASPAR yes 34411982
chr1 200042026 200042040 ONECUT1 JASPAR yes 34411983
chr1 200042026 200042040 ONECUT2 JASPAR yes 34411984
chr1 200042026 200042040 ONECUT3 JASPAR yes 34411985
chr1 200042027 200042037 PAX3 JASPAR yes 34411986
chr1 200042027 200042037 PAX7 JASPAR yes 34411987
chr1 200042027 200042038 PHOX2A JASPAR yes 34411988
chr1 200042027 200042038 PROP1 JASPAR yes 34411989
chr1 200042030 200042042 MEF2A JASPAR yes 34411990
chr1 200042030 200042047 BCL6B JASPAR yes 34411991
Genes associated with rs3828112[chr1:200042031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More