EnhancerDB
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  3. rs3829669[chr19:3371320]
Enhancers that have rs3829669[chr19:3371320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3829669[chr19:3371320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 21838839
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 108366114
chr19 3364060 3371907 ZNF274 GTRD no Bone Marrow (K562) 108366115
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 21838841
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 108366118
chr19 3364451 3371976 ZNF274 GTRD no Blood (GM12878) 108366119
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 21838845
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 108366123
chr19 3364794 3371972 ZNF274 GTRD no Blood (GM12878) 108366124
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 21838846
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 108366125
chr19 3364848 3371994 ZNF274 GTRD no Blood (GM12878) 108366126
chr19 3371313 3371334 IRF1 JASPAR yes 112124203
chr19 3371314 3371335 IRF1 JASPAR yes 112124204
chr19 3371316 3371337 IRF1 JASPAR yes 112124205
chr19 3371317 3371338 IRF1 JASPAR yes 112124206
chr19 3371318 3371333 FOXP1 JASPAR yes 112124207
chr19 3371318 3371339 IRF1 JASPAR yes 112124208
chr19 3371319 3371334 FOXP1 JASPAR yes 112124209
chr19 3371319 3371340 IRF1 JASPAR yes 112124210
chr19 3371320 3371335 FOXP1 JASPAR yes 112124211
chr19 3371320 3371341 IRF1 JASPAR yes 112124212
Genes associated with rs3829669[chr19:3371320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More