EnhancerDB
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  3. rs3835514[chr1:12245360]
Enhancers that have rs3835514[chr1:12245360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
chr1 12245348 12245387 vista398
VISTA
Transcript factors that have rs3835514[chr1:12245360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12244732 12245675 TEF1 GTRD no Bone (Osteoblast) 107802110
chr1 12245350 12245361 NFKB1 JASPAR yes 26807749
chr1 12245350 12245361 NFKB1 JASPAR yes 118232686
chr1 12245351 12245361 REL JASPAR yes 26807750
chr1 12245351 12245361 REL JASPAR yes 118232687
chr1 12245351 12245372 IRF1 JASPAR yes 26807751
chr1 12245351 12245372 IRF1 JASPAR yes 118232688
chr1 12245354 12245368 SPIC JASPAR yes 26807753
chr1 12245354 12245368 SPIC JASPAR yes 118232690
chr1 12245355 12245363 FEV JASPAR yes 26807754
chr1 12245355 12245363 FEV JASPAR yes 118232691
chr1 12245355 12245376 IRF1 JASPAR yes 26807755
chr1 12245355 12245376 IRF1 JASPAR yes 118232692
chr1 12245356 12245377 ZNF263 JASPAR yes 26807756
chr1 12245356 12245377 ZNF263 JASPAR yes 118232693
chr1 12245357 12245362 ETS2 TRANSFAC yes 26807757
chr1 12245357 12245362 ETS2 TRANSFAC yes 118232694
chr1 12245357 12245372 PRDM1 JASPAR yes 26807758
chr1 12245357 12245372 PRDM1 JASPAR yes 118232695
chr1 12245357 12245378 IRF1 JASPAR yes 26807759
chr1 12245357 12245378 IRF1 JASPAR yes 118232696
chr1 12245359 12245380 ZNF263 JASPAR yes 26807760
chr1 12245359 12245380 ZNF263 JASPAR yes 118232697
chr1 12245360 12245374 STAT1 JASPAR yes 26807761
chr1 12245360 12245374 STAT1 JASPAR yes 118232698
Genes associated with rs3835514[chr1:12245360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More