EnhancerDB
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  3. rs3842543[chr1:44231607]
Enhancers that have rs3842543[chr1:44231607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 44221165 44237481 enh300
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs3842543[chr1:44231607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44231601 44231610 SRY JASPAR yes 28516473
chr1 44231603 44231612 SOX9 JASPAR yes 28516475
chr1 44231604 44231620 SOX8 JASPAR yes 28516476
Genes associated with rs3842543[chr1:44231607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More