EnhancerDB
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  3. rs3845416[chr1:180896031]
Enhancers that have rs3845416[chr1:180896031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180889388 180897070 enh12427
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs3845416[chr1:180896031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180895258 180896125 ZNF274 GTRD no Liver (HepG2) 21354176
chr1 180895258 180896125 ZNF274 GTRD no Liver (HepG2) 107848028
chr1 180895640 180896096 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848030
chr1 180895647 180896167 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21354178
chr1 180895647 180896167 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107848031
chr1 180895684 180896124 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848033
chr1 180895693 180896069 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848034
chr1 180895765 180896078 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848038
chr1 180896014 180896035 IRF1 JASPAR yes 33542460
chr1 180896017 180896031 STAT1 JASPAR yes 33542461
chr1 180896018 180896032 IRF7 JASPAR yes 33542462
chr1 180896018 180896033 IRF9 JASPAR yes 33542463
Genes associated with rs3845416[chr1:180896031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More