EnhancerDB
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  3. rs3887417[chr17:76253657]
Enhancers that have rs3887417[chr17:76253657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76244565 76276933 enh4623
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3887417[chr17:76253657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76251394 76253731 ZNF274 GTRD no Blood (GM12878) 21792027
chr17 76251546 76253672 ZNF274 GTRD no Bone Marrow (K562) 21792037
chr17 76251612 76253685 ZNF274 GTRD no Blood (GM12878) 21792038
chr17 76252814 76253662 ZNF274 GTRD no Bone Marrow (K562) 21792128
chr17 76253011 76253698 ZNF274 GTRD no Blood (GM12878) 21792137
chr17 76253197 76253721 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21792145
chr17 76253504 76254000 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21792147
Genes associated with rs3887417[chr17:76253657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 76783463 76837523 - USP36 ENSG00000055483.15 76837523 529806 Breast 0.238872 16316