EnhancerDB
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  3. rs389354[chr19:4972982]
Enhancers that have rs389354[chr19:4972982]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs389354[chr19:4972982]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 21842892
chr19 4971025 4973751 TCF7L2 GTRD no Colon (HCT116) 108374026
chr19 4972974 4972989 HNF4A JASPAR yes 112200649
chr19 4972975 4972990 HNF4G JASPAR yes 112200650
chr19 4972981 4972996 HNF4A JASPAR yes 112200651
chr19 4972982 4972996 NR2F1 JASPAR yes 112200652
chr19 4972982 4972997 HNF4G JASPAR yes 112200653
chr19 4972982 4972997 NR2C2 JASPAR yes 112200654
Genes associated with rs389354[chr19:4972982], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More