EnhancerDB
  1. Home
  2. SNP
  3. rs3900890[chr16:88268711]
Enhancers that have rs3900890[chr16:88268711]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs3900890[chr16:88268711]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88268283 88268799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735566
chr16 88268351 88268727 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735567
chr16 88268546 88269370 TCF7L2 GTRD no Colon (HCT116) 21735570
chr16 88268704 88268723 REST JASPAR yes 12268890
Genes associated with rs3900890[chr16:88268711], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More