EnhancerDB
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Enhancers that have rs3902968[chr1:205639045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 205638734 205639222 vista4758
VISTA
Transcript factors that have rs3902968[chr1:205639045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205638532 205639053 ZNF274 GTRD no Bone Marrow (K562) 107862433
chr1 205638759 205639089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372162
chr1 205638759 205639089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862435
chr1 205638795 205639105 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21372163
chr1 205638795 205639105 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107862436
chr1 205638830 205639110 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372165
chr1 205638830 205639110 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862438
chr1 205638874 205639319 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372166
chr1 205638874 205639319 EBF1 UCSC Txn Factor no Conserved 107862439
chr1 205638874 205639319 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862440
chr1 205638891 205639275 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372167
chr1 205638891 205639275 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862441
chr1 205638958 205639394 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372168
chr1 205638958 205639394 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862442
chr1 205638979 205639349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372169
chr1 205638979 205639349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862443
chr1 205638987 205639417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372170
chr1 205638987 205639417 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862444
chr1 205639038 205639051 NFKB1 JASPAR yes 34777904
chr1 205639038 205639051 NFKB2 JASPAR yes 34777905
chr1 205639038 205639051 NFKB1 JASPAR yes 118441876
chr1 205639038 205639051 NFKB2 JASPAR yes 118441877
Genes associated with rs3902968[chr1:205639045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More