EnhancerDB
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  3. rs3936069[chr1:203279919]
Enhancers that have rs3936069[chr1:203279919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3936069[chr1:203279919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203278653 203279976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368065
chr1 203278869 203283583 ZNF143 GTRD no Epithelial (MCF-7) 21368068
chr1 203279864 203283218 ZNF143 GTRD no Epithelial (MCF-7) 21368074
chr1 203279903 203283339 ZNF143 GTRD no Epithelial (MCF-7) 21368075
chr1 203279906 203279921 FOXP1 JASPAR yes 34615636
chr1 203279907 203279921 ONECUT2 JASPAR yes 34615637
chr1 203279907 203279921 ONECUT3 JASPAR yes 34615638
chr1 203279913 203279934 IRF1 JASPAR yes 34615641
chr1 203279914 203279929 FOXP1 JASPAR yes 34615642
chr1 203279914 203279935 IRF1 JASPAR yes 34615643
chr1 203279915 203279930 STAT2 JASPAR yes 34615644
chr1 203279919 203279934 FOXP1 JASPAR yes 34615645
Genes associated with rs3936069[chr1:203279919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More