EnhancerDB
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  3. rs3952609[chr1:156631940]
Enhancers that have rs3952609[chr1:156631940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156627761 156638505 enh12301
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Embryonic Stem Cell Line (H1-hESC) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 156630249 156635284 vista106
VISTA
chr1 156631732 156631960 vista3472
VISTA
Transcript factors that have rs3952609[chr1:156631940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107686537
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107836931
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107836932
chr1 156629513 156632320 POLR2A UCSC Txn Factor no Conserved 107836933
chr1 156631648 156632372 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837174
chr1 156631648 156632372 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837175
chr1 156631704 156631948 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837176
chr1 156631787 156632948 ZNF143 GTRD no Epithelial (MCF-7) 107837177
chr1 156631787 156632948 ZNF143 GTRD no Epithelial (MCF-7) 107837178
chr1 156631828 156632192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342824
chr1 156631828 156632192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107837179
chr1 156631870 156632310 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837180
chr1 156631870 156632310 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837181
chr1 156631935 156632285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837182
chr1 156631935 156632285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107837183
Genes associated with rs3952609[chr1:156631940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More