EnhancerDB
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  3. rs397687800[chr18:51772195]
Enhancers that have rs397687800[chr18:51772195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs397687800[chr18:51772195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51772184 51772202 NR3C1 JASPAR yes 110710575
chr18 51772188 51772202 SPIC JASPAR yes 110710576
chr18 51772189 51772210 IRF1 JASPAR yes 110710577
chr18 51772191 51772206 PRDM1 JASPAR yes 110710578
chr18 51772191 51772206 STAT2 JASPAR yes 110710579
chr18 51772194 51772209 FOXP1 JASPAR yes 110710580
chr18 51772195 51772210 FOXP1 JASPAR yes 110710581
Genes associated with rs397687800[chr18:51772195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More