-
Home
- SNP
- rs397699130[chr17:38631330]
Enhancers that have rs397699130[chr17:38631330]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
38624049 |
38636319 |
enh17140 |
|
|
Transcript factors that have rs397699130[chr17:38631330]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
38625832
|
38632154
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108255091
|
|
|
chr17
|
38627061
|
38631466
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108255092
|
|
|
chr17
|
38631061
|
38631341
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108255095
|
|
|
chr17
|
38631290
|
38631554
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21754047
|
|
|
chr17
|
38631290
|
38631554
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108255096
|
|
|
chr17
|
38631312
|
38631330
|
NR3C1
|
JASPAR
|
yes
|
|
54215353
|
|
|
chr17
|
38631313
|
38631334
|
IRF1
|
JASPAR
|
yes
|
|
54215354
|
|
|
chr17
|
38631314
|
38631335
|
IRF1
|
JASPAR
|
yes
|
|
54215355
|
|
|
chr17
|
38631315
|
38631336
|
IRF1
|
JASPAR
|
yes
|
|
54215356
|
|
|
chr17
|
38631319
|
38631340
|
IRF1
|
JASPAR
|
yes
|
|
54215357
|
|
|
chr17
|
38631320
|
38631335
|
FOXP1
|
JASPAR
|
yes
|
|
54215358
|
|
|
chr17
|
38631320
|
38631341
|
IRF1
|
JASPAR
|
yes
|
|
54215359
|
|
|
chr17
|
38631324
|
38631345
|
IRF1
|
JASPAR
|
yes
|
|
54215360
|
|
|
chr17
|
38631325
|
38631340
|
FOXP1
|
JASPAR
|
yes
|
|
54215361
|
|
|
chr17
|
38631327
|
38631342
|
FOXP1
|
JASPAR
|
yes
|
|
54215362
|
|
|
chr17
|
38631329
|
38631344
|
FOXP1
|
JASPAR
|
yes
|
|
54215363
|
|
|
chr17
|
38631330
|
38631345
|
FOXP1
|
JASPAR
|
yes
|
|
54215364
|
|
Genes associated with rs397699130[chr17:38631330], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |