EnhancerDB
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  3. rs397717456[chr19:4993424]
Enhancers that have rs397717456[chr19:4993424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397717456[chr19:4993424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4993413 4993427 EBF1 JASPAR yes 112203651
chr19 4993414 4993425 EBF1 JASPAR yes 112203652
chr19 4993415 4993426 EBF1 JASPAR yes 112203653
chr19 4993418 4993433 FOXP1 JASPAR yes 112203654
chr19 4993418 4993439 IRF1 JASPAR yes 112203655
chr19 4993419 4993440 IRF1 JASPAR yes 112203656
chr19 4993421 4993442 IRF1 JASPAR yes 112203657
chr19 4993422 4993437 FOXP1 JASPAR yes 112203658
chr19 4993424 4993439 FOXP1 JASPAR yes 112203659
Genes associated with rs397717456[chr19:4993424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More