EnhancerDB
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  3. rs397739772[chr17:75333080]
Enhancers that have rs397739772[chr17:75333080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397739772[chr17:75333080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75333074 75333095 IRF1 JASPAR yes 56068849
chr17 75333075 75333096 IRF1 JASPAR yes 56068850
chr17 75333077 75333098 IRF1 JASPAR yes 56068851
chr17 75333078 75333099 IRF1 JASPAR yes 56068852
chr17 75333079 75333094 FOXP1 JASPAR yes 56068853
chr17 75333079 75333100 IRF1 JASPAR yes 56068854
chr17 75333080 75333095 FOXP1 JASPAR yes 56068855
chr17 75333080 75333101 IRF1 JASPAR yes 56068856
Genes associated with rs397739772[chr17:75333080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More