EnhancerDB
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  3. rs397740340[chr6:42534463]
Enhancers that have rs397740340[chr6:42534463]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42529545 42539789 enh9123
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Stomach
Transcript factors that have rs397740340[chr6:42534463]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42534457 42534478 IRF1 JASPAR yes 101730555
chr6 42534459 42534474 STAT2 JASPAR yes 101730556
chr6 42534459 42534480 IRF1 JASPAR yes 101730557
chr6 42534463 42534478 FOXP1 JASPAR yes 101730558
chr6 42534463 42534484 IRF1 JASPAR yes 101730559
Genes associated with rs397740340[chr6:42534463], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More