EnhancerDB
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  3. rs397753754[chr1:245124556]
Enhancers that have rs397753754[chr1:245124556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 245118747 245130790 enh12854
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Thyroid Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Heart
Transcript factors that have rs397753754[chr1:245124556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 245124545 245124566 ZNF263 JASPAR yes 36755606
chr1 245124550 245124560 SP1 JASPAR yes 36755610
chr1 245124550 245124564 GLIS2 JASPAR yes 36755611
chr1 245124550 245124564 GLIS3 JASPAR yes 36755612
chr1 245124550 245124564 ZIC1 JASPAR yes 36755613
chr1 245124551 245124559 SP1 TRANSFAC yes 36755614
chr1 245124552 245124557 SP1 TRANSFAC yes 36755615
chr1 245124553 245124558 SP1 TRANSFAC yes 36755616
chr1 245124553 245124559 SP1 TRANSFAC yes 36755617
chr1 245124554 245124574 RREB1 JASPAR yes 36755618
chr1 245124556 245124570 PLAG1 JASPAR yes 36755619
chr1 245124556 245124571 NR2C2 JASPAR yes 36755620
Genes associated with rs397753754[chr1:245124556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More