EnhancerDB
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  3. rs397756562[chr1:23968378]
Enhancers that have rs397756562[chr1:23968378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397756562[chr1:23968378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23968357 23968378 IRF1 JASPAR yes 27452063
chr1 23968361 23968382 IRF1 JASPAR yes 27452066
chr1 23968362 23968383 IRF1 JASPAR yes 27452068
chr1 23968363 23968378 FOXP1 JASPAR yes 27452069
chr1 23968363 23968384 IRF1 JASPAR yes 27452070
chr1 23968367 23968388 IRF1 JASPAR yes 27452071
chr1 23968368 23968383 FOXP1 JASPAR yes 27452072
chr1 23968368 23968389 IRF1 JASPAR yes 27452073
chr1 23968372 23968393 IRF1 JASPAR yes 27452074
chr1 23968373 23968388 FOXP1 JASPAR yes 27452075
chr1 23968375 23968390 FOXP1 JASPAR yes 27452076
chr1 23968377 23968392 FOXP1 JASPAR yes 27452077
chr1 23968378 23968393 FOXP1 JASPAR yes 27452078
Genes associated with rs397756562[chr1:23968378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More