EnhancerDB
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  3. rs397784818[chr5:149699459]
Enhancers that have rs397784818[chr5:149699459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs397784818[chr5:149699459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149699442 149699463 IRF1 JASPAR yes 66873859
chr5 149699446 149699461 PRDM1 JASPAR yes 66873862
chr5 149699446 149699461 STAT2 JASPAR yes 66873863
chr5 149699446 149699464 IRF2 JASPAR yes 66873864
chr5 149699447 149699459 IRF1 JASPAR yes 66873865
chr5 149699448 149699469 IRF1 JASPAR yes 66873866
chr5 149699454 149699475 IRF1 JASPAR yes 66873867
chr5 149699456 149699477 IRF1 JASPAR yes 66873868
chr5 149699457 149699472 FOXP1 JASPAR yes 66873869
chr5 149699458 149699473 FOXP1 JASPAR yes 66873870
Genes associated with rs397784818[chr5:149699459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More